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生物学・生命科学・基礎医学
必須アミノ酸,非必須アミノ酸 その二つを分けたもの:細胞外タンパク質仮説
江角, 元史郎
必須アミノ酸
非必須アミノ酸
細胞外タンパク質合成
進化生物学
ダウンロード
:241
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投稿日時:2024-02-09 05:29:31 UTC - 公開日時:2024-02-14 10:29:30 UTC
PDF (English)
The Standard Genetic Code Predominantly Assigns Uracil-Containing Codons to Amino Acids Enriched in Transmembrane Domains and Uracil-Free Codons to Amino Acids Enriched in Intrinsically Disordered Regions
Esumi, Genshiro
genetic code
transmembrane domains
intrinsically disordered regions
purpose
origin
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:141
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投稿日時:2024-01-05 05:49:44 UTC - 公開日時:2024-01-10 09:00:15 UTC
PDF (English)
Fabrication of a cell culture scaffold that mimics the composition and structure of bone marrow extracellular matrix
Yamaguchi, Ayana、Hashimoto, Yoshihide、Negishi, Jun
decellularized fetal bone marrow
extracellular matrix
cell culture scaffold
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:115
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投稿日時:2023-12-23 22:57:59 UTC - 公開日時:2023-12-27 04:09:20 UTC
PDF (English)
Single-cell mean rank gene set scoring method for between-dataset comparison of scRNA-seq data
Dazhou Li、Meng, Guohao、Jieyu Wu、Guihui Tong
single-cell analysis
RNA sequencing
gene set analysis
glioblastoma
NF-κB pathway
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:151
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投稿日時:2023-12-21 21:05:12 UTC - 公開日時:2023-12-26 01:05:53 UTC
PDF (English)
Supplement_PDF (English)
Statistical Extremes of Amino Acid Residue Composition of the Proteome Proteins Can Explain the Origin of the Universality of the Genetic Code
Esumi, Genshiro
amino acid composition
transmembrane domain
intrinsically disordered region
genetic code
optimized translation theory
Chargaff’s second parity rule
GC content
TA skew
GC skew
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:108
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投稿日時:2023-12-17 20:56:15 UTC - 公開日時:2023-12-22 04:20:16 UTC
PDF (English)
The Synonymous Codon Usage of a Protein Gene Is Primarily Determined by the Guanine + Cytosine Content of the Individual Gene Rather Than the Species to Which It Belongs To Synthesize Proteins With a Balanced Amino Acid Composition
Esumi, Genshiro
codon usage bias
standard genetic code
GC content
amino acid composition
proteome
ダウンロード
:116
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投稿日時:2023-12-01 03:10:20 UTC - 公開日時:2023-12-05 04:18:09 UTC
PDF (English)
Supplement-1_PDF (English)
Supplement-2_PDF (English)
Supplement-3_PDF (English)
Supplement-4_PDF (English)
Supplement-5_CSV (English)
Anomalous biases of reverse mutations in SARS-CoV-2 variants
Kakeya, Hideki、Tatsuya Kanzaki
SARS-CoV-2
variant of concerns
reverse mutation
point mutation
homologous recombination
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:488
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投稿日時:2023-10-31 01:13:05 UTC - 公開日時:2023-11-17 00:39:01 UTC
PDF (English)
The standard genetic code is designed to generate transmembrane domains and intrinsically disordered regions as projections of the thymine density on the gene
Esumi, Genshiro
standard genetic code
thymine composition
transmembrane domains
intrinsically disordered regions
optimized translation
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:167
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投稿日時:2023-10-20 05:35:01 UTC - 公開日時:2023-10-25 23:27:30 UTC
PDF (English)
Recognition of two subspecies of Lactobacillus amylovorus, with proposal of Lactobacillus amylovorus subsp. animalis subsp. nov. isolated from bovine feces and Lactobacillus amylovorus subsp. amylovorus, and an emended description of Lactobacillus amylovorus
Kenji Yamane、Yasuhiro Tanizawa、Hisami Kobayashi、Tomomi Kamizono、Yoichiro Kojima、Hiroki Takagi、Masanori Tohno
lactic acid bacteria
bacillota
lactobacillus amylovorus subsp. animalis
bovine feves
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:151
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投稿日時:2023-10-12 07:45:23 UTC - 公開日時:2023-10-17 01:53:44 UTC
PDF (English)
Supplement_PDF (English)
The genus Hansenula Sydow et Sydow (1919) nom. rev. and the genus Wickerhamomyces Kurtzman et al. (2008)
Taweesak Malimas、Huong Thi Lan Vu、Pattaraporn Yukphan、Somboon Tanasupawat、Yamada, Yuzo
Wickerhamomyces canadensis
Wickerhamomyces anomalus
Hansenula anomala
Hansenula lynferdii
Hansenula myanmarensis
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:210
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投稿日時:2023-06-02 05:23:48 UTC - 公開日時:2023-10-13 05:56:13 UTC
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バージョン:5
PDF_ver.5 (English)
Customizable OpenGUS immunoassay: a homogeneous detection system using split β-glucuronidase and label-free antibody
Zhu, Bo、Yamasaki, Yukihiko、Yasuda, Takanobu、Qian, Cheng、Qiu, Zhirou、Ueda, Hiroshi、Kitaguchi, Tetsuya
immunoassay
β-glucuronidase
antibody
Cry j 1
C-creative protein
lactoferrin
homogeneous
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:188
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投稿日時:2023-09-25 23:17:59 UTC - 公開日時:2023-09-26 08:01:58 UTC
PDF (English)
Supplement_PDF (English)
新型コロナウイルス mRNAワクチンBNT162b2により誘導されるIgGのレクチンマイクロアレイ解析
Fidan, Ozan、Bilginer, Burcak、Metan, Gökhan、Meliha Cagla Sonmezer
新型コロナウイルス
mRNAワクチン
イムノグロブリン
Fc領域の糖鎖
レクチンマイクロアレイ
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:334
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投稿日時:2023-09-05 13:06:18 UTC - 公開日時:2023-09-11 01:30:13 UTC
PDF
Supplement-1_PDF
Supplement-2_PDF
Regulation of macrophages in allergy by non-coding RNAs
Ishibashi, Osamu、Stefan Muljo、Zohirul Islam
noncoding RNA
allergy
macrophage
macrophage polarization
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:131
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投稿日時:2023-09-05 03:17:17 UTC - 公開日時:2023-09-07 01:55:31 UTC
PDF (English)
Identification of a novel ephemerovirus in a water buffalo (Bubalus bubalis [Linnaeus, 1758])
Imai, Sakiho、Kishimoto, Mai、Horie, Masayuki
Bubalus bubalis
ephemerovirus
water buffalo
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:194
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投稿日時:2023-09-01 14:31:16 UTC - 公開日時:2023-09-05 23:19:15 UTC
PDF (English)
Supplement-1_PDF (English)
Supplement-2_PDF (English)
Supplement-3_FASTA (English)
Supplement-4_TXT (English)
Supplement-5_TXT (English)
Association analysis between type 2 diabetes and the gut microbiota: a community-based cross-sectional study in Japan
Nagashima, Koji、Takayoshi Hisada、Jun Mochizuki、Tatsuya Mikami、Yoshinori Tamada、Shigeyuki Nakaji
gut microbiota
type 2 diabetes
Lactobacillales
community-based cross-sectional study
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:498
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投稿日時:2022-06-27 01:54:04 UTC - 公開日時:2023-08-14 06:19:38 UTC
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バージョン:5
PDF_ver.5 (English)
Supplement_XLSX_ver.5 (English)
The Revision of Schizosaccharomycetaceae
Taweesak Malimas、Huong Thi Lan Vu、Pattaraporn Yukphan、Somboon Tanasupawat、Kozaburo Mikata、Yamada, Yuzo
Schizosaccharomyces
Octosporomyces
Hasegawaea
fission yeasts
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:384
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投稿日時:2022-10-13 14:14:53 UTC - 公開日時:2023-08-07 06:20:11 UTC
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バージョン:4
PDF_ver.4 (English)
First noncontact millimeter-wave radar measurement of heart rate in great apes: validation in chimpanzees (Pan troglodytes)
Matsumoto, Takuya、Iwata, Itsuki、Sakamoto, Takuya、Hirata, Satoshi
noncontact measurement
vital sign
heart rate
millimeter-wave ultrawide-band array radar
animal welfare
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:294
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投稿日時:2023-07-15 05:54:30 UTC - 公開日時:2023-07-19 00:39:23 UTC
PDF (English)
The TA Skew of a Gene Primarily Determines the Type of Protein, Such as Membrane Protein or Intrinsically Disordered Protein
Esumi, Genshiro
TA skew
nucleic acid composition
transmembrane domain
intrinsically disordered region
genetic code
ダウンロード
:115
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投稿日時:2023-07-08 03:42:56 UTC - 公開日時:2023-07-13 06:08:28 UTC
PDF (English)
The Nucleic Acid Sequences of the Genome Are Highly Structured on a Genome-Wide Scale in Terms of Nucleic Acid Composition Indices Such as TA Skew and GC Skew
Esumi, Genshiro
genome structure
TA skew
GC skew
GC content
symmetry
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:121
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投稿日時:2023-07-01 23:48:46 UTC - 公開日時:2023-07-04 04:47:06 UTC
PDF (English)
The Total Body Amino Acid Composition of an Animal Could Be Explained by a Mixture of the Average Composition of Its Proteome as an Intracellular Composition Estimate and the Type I Collagen Composition as an Extracellular Composition Estimate
Esumi, Genshiro
amino acid composition
whole body
intracellular protein
extracellular matrix
collagen
ダウンロード
:104
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投稿日時:2023-06-22 08:19:04 UTC - 公開日時:2023-06-27 06:05:45 UTC
PDF (English)
Collective Cell Dynamics and Luminal Fluid Flow in the Epididymis: A Mechanobiological Perspective
Veronica Lee Xi Min、Barry T. Hinton、Hirashima, Tsuyoshi
Collective Cell Dynamics
Epididymis
Luminal Fluid Flow
Mechanobiology
Wolffian Duct
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:184
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投稿日時:2023-06-09 10:21:55 UTC - 公開日時:2023-06-13 01:44:03 UTC
PDF (English)
The Distributions of Amino Acid Compositions of Proteins in an Organism's Proteome Uniformly Approximate Binomial Distributions
Esumi, Genshiro
proteome
amino acid composition
distribution
binomial distribution
resource
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:168
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投稿日時:2023-06-09 06:46:03 UTC - 公開日時:2023-06-13 01:42:18 UTC
PDF (English)
The generic circumscription of Mrakia and Mrakiella: The proposal of Thomashallia gen. nov.
Taweesak Malimas、Huong Thi Lan Vu、Pattaraporn Yukphan、Somboon Tanasupawat、Yamada, Yuzo
Mrakia frigida
Mrakiella cryoconiti
Thomashallia gen. nov.
Thomashallia stelviica comb. nov.
Thomashallia montana comb. nov.
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:134
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投稿日時:2023-05-21 01:39:38 UTC - 公開日時:2023-05-31 05:19:08 UTC
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バージョン:2
PDF_ver.2 (English)
The Generic Circumscription of Mrakia and Related Taxa (Psychrophilic Yeasts)
Yamada, Yuzo、Huong Thi Lan Vu、Pattaraporn Yukphan、Somboon Tanasupawat
Mrakia
Mrakia frigida
Mrakiella
Mrakiella cryoconiti
Krasilnikovozyma curviuscula
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:372
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投稿日時:2022-12-21 10:22:24 UTC - 公開日時:2023-05-15 00:23:26 UTC
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バージョン:6
PDF_ver.6 (English)
GWASLab: a Python package for processing and visualizing GWAS summary statistics
He, Yunye、Masaru Koido、Yuka Shimmori、Yoichiro Kamatani
GWAS
Python
summary statistics
visualization
QC
ダウンロード
:882
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投稿日時:2023-04-28 08:36:45 UTC - 公開日時:2023-05-01 09:59:49 UTC
PDF (English)
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