Preprint / Version 1

Elucidating the Pathogenic Mechanisms of Autism Spectrum Disorder Using Brain Organoids: Assessment of Environmental Factors and Challenges

##article.authors##

  • Kenyu Nakamura Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba
  • Sae Sanaka Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba
  • Koki Higuchi Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba
  • Asumi Kubo Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba
  • Sara Kamiya Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba
  • Tetsuya Sasaki Laboratory of Anatomy and Neuroscience, Department of Biomedical Sciences, Institute of Medicine, University of Tsukuba https://orcid.org/0000-0002-7723-4417 https://researchmap.jp/tsasak

DOI:

https://doi.org/10.51094/jxiv.894

Keywords:

Autism Spectrum Disorder, Brain Organoids, Environmental Factors, in vitro Models, Neurodevelopment

Abstract

Autism Spectrum Disorder (ASD) is a complex neurodevelopmental disorder, and elucidating its pathogenic mechanisms is an urgent task. Recently, brain organoid technology derived from human stem cells has brought innovation to ASD research. This three-dimensional culture model is particularly useful for studying environmental factors in ASD. It allows direct observation of how environmental factors such as drug exposure and infections affect human neurodevelopment, and enables long-term impact assessment. Furthermore, using iPSCs derived from patients makes it possible to conduct research considering individual genetic backgrounds. These advantages provide new insights into the complex etiology of ASD. However, challenges such as limitations in maturity and reproducibility exist. While emphasizing ethical considerations, efforts are being made to overcome these drawbacks through technological improvements and integration with other fields. In the future, this technology is expected to significantly contribute to accelerating the elucidation of ASD pathology and the development of new therapeutic approaches.

Conflicts of Interest Disclosure

The authors declare that they have no competing interests.

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References

Gangopadhyay M. DSM-5-TR® self-exam questions. Muskin PR, Dickerman AL, Drysdale A, Holderness CC, editors. Arlington, TX: American Psychiatric Association Publishing; 2023. 488 p.

Bai D, Yip BHK, Windham GC, Sourander A, Francis R, Yoffe R, et al. Association of genetic and environmental factors with autism in a 5-country cohort. JAMA Psychiatry. 2019 Oct 1;76(10):1035–43.

Marton RM, Pașca SP. Organoid and assembloid technologies for investigating cellular crosstalk in human brain development and disease. Trends Cell Biol. 2020 Feb;30(2):133–43.

Amin ND, Paşca SP. Building models of brain disorders with three-dimensional organoids. Neuron. 2018 Oct 24;100(2):389–405.

Lancaster MA, Knoblich JA. Organogenesis in a dish: modeling development and disease using organoid technologies. Science. 2014 Jul 18;345(6194):1247125.

Qian X, Song H, Ming G-L. Brain organoids: advances, applications and challenges. Development. 2019 Apr 16;146(8):dev166074.

Quadrato G, Brown J, Arlotta P. The promises and challenges of human brain organoids as models of neuropsychiatric disease. Nat Med. 2016 Nov;22(11):1220–8.

Trujillo CA, Gao R, Negraes PD, Gu J, Buchanan J, Preissl S, et al. Complex oscillatory waves emerging from cortical organoids model early human brain network development. Cell Stem Cell. 2019 Oct 3;25(4):558-569.e7.

Pollen AA, Bhaduri A, Andrews MG, Nowakowski TJ, Meyerson OS, Mostajo-Radji MA, et al. Establishing cerebral organoids as models of human-specific brain evolution. Cell. 2019 Feb 7;176(4):743-756.e17.

Velasco S, Kedaigle AJ, Simmons SK, Nash A, Rocha M, Quadrato G, et al. Individual brain organoids reproducibly form cell diversity of the human cerebral cortex. Nature. 2019 Jun;570(7762):523–7.

Mariani J, Coppola G, Zhang P, Abyzov A, Provini L, Tomasini L, et al. FOXG1-dependent dysregulation of GABA/glutamate neuron differentiation in autism spectrum disorders. Cell. 2015 Jul 16;162(2):375–90.

Adhya D, Swarup V, Nagy R, Dutan L, Shum C, Valencia-Alarcón EP, et al. Atypical neurogenesis in induced pluripotent stem cells from autistic individuals. Biol Psychiatry. 2021 Mar 1;89(5):486–96.

Janssens S, Schotsaert M, Karnik R, Balasubramaniam V, Dejosez M, Meissner A, et al. Zika virus alters DNA methylation of neural genes in an organoid model of the developing human brain. mSystems [Internet]. 2018 Jan;3(1). Available from: http://dx.doi.org/10.1128/mSystems.00219-17

Amiri A, Coppola G, Scuderi S, Wu F, Roychowdhury T, Liu F, et al. Transcriptome and epigenome landscape of human cortical development modeled in organoids. Science. 2018 Dec 14;362(6420):eaat6720.

Sasaki T. The role of immune system molecules in cortical formation and their abnormalities in psychiatric disorders. DOHaD Research. 2023;11(2):126–34.

Kubo A, Kamiya S, Higuchi K, Nakamura K, Kishi K, Sasaki T. Influence of maternal immune activity on fetal survival and brain development: critical role of IL-17A and microglia. jxiv.jst.go.jp [Internet]. Available from: https://jxiv.jst.go.jp/index.php/jxiv/preprint/view/861

Sasaki T. Prenatal Programming and Autism Spectrum Disorders. DOHaD Research. 2023;11(1):15–6.

Christensen J, Grønborg TK, Sørensen MJ, Schendel D, Parner ET, Pedersen LH, et al. Prenatal valproate exposure and risk of autism spectrum disorders and childhood autism. JAMA. 2013 Apr 24;309(16):1696–703.

Al-Haddad BJS, Jacobsson B, Chabra S, Modzelewska D, Olson EM, Bernier R, et al. Long-term risk of neuropsychiatric disease after exposure to infection in utero. JAMA Psychiatry. 2019 Jun 1;76(6):594–602.

Kubo A, Sasaki T. IL-17 signaling and neuroimmunology: Psoriasis to Autism Spectrum Disorder [Internet]. Jxiv; 2024. Available from: http://dx.doi.org/10.51094/jxiv.869

Egorova O, Myte R, Schneede J, Hägglöf B, Bölte S, Domellöf E, et al. Maternal blood folate status during early pregnancy and occurrence of autism spectrum disorder in offspring: a study of 62 serum biomarkers. Mol Autism. 2020 Jan 16;11(1):7.

Modabbernia A, Velthorst E, Reichenberg A. Environmental risk factors for autism: an evidence-based review of systematic reviews and meta-analyses. Mol Autism. 2017 Mar 17;8(1):13.

Wu S, Wu F, Ding Y, Hou J, Bi J, Zhang Z. Advanced parental age and autism risk in children: a systematic review and meta-analysis. Acta Psychiatr Scand. 2017 Jan;135(1):29–41.

Scheinost D, Sinha R, Cross SN, Kwon SH, Sze G, Constable RT, et al. Does prenatal stress alter the developing connectome? Pediatr Res. 2017 Jan;81(1–2):214–26.

Schafer ST, Paquola ACM, Stern S, Gosselin D, Ku M, Pena M, et al. Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons. Nat Neurosci. 2019 Feb;22(2):243–55.

Sen D, Voulgaropoulos A, Drobna Z, Keung AJ. Human cerebral organoids reveal early spatiotemporal dynamics and pharmacological responses of UBE3A. Stem Cell Reports. 2020 Oct 13;15(4):845–54.

Lu X, Yang J, Xiang Y. Modeling human neurodevelopmental diseases with brain organoids. Cell Regen (Lond). 2022 Jan 4;11(1):1.

Penzes P, Cahill ME, Jones KA, VanLeeuwen J-E, Woolfrey KM. Dendritic spine pathology in neuropsychiatric disorders. Nat Neurosci. 2011 Mar;14(3):285–93.

Watanabe M, Buth JE, Vishlaghi N, de la Torre-Ubieta L, Taxidis J, Khakh BS, et al. Self-organized cerebral organoids with human-specific features predict effective drugs to combat Zika virus infection. Cell Rep. 2017 Oct;21(2):517–32.

Tian Y, Voineagu I, Paşca SP, Won H, Chandran V, Horvath S, et al. Alteration in basal and depolarization induced transcriptional network in iPSC derived neurons from Timothy syndrome. Genome Med. 2014 Oct 10;6(10):75.

Bhattacharya A, Choi WWY, Muffat J, Li Y. Modeling developmental brain diseases using human pluripotent stem cells-derived brain organoids - progress and perspective. J Mol Biol. 2022 Feb 15;434(3):167386.

Eichmüller OL, Knoblich JA. Human cerebral organoids - a new tool for clinical neurology research. Nat Rev Neurol. 2022 Nov;18(11):661–80.

Paulsen B, Velasco S, Kedaigle AJ, Pigoni M, Quadrato G, Deo AJ, et al. Autism genes converge on asynchronous development of shared neuron classes. Nature. 2022 Feb;602(7896):268–73.

Zaslavsky K, Zhang W-B, McCready FP, Rodrigues DC, Deneault E, Loo C, et al. SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons. Nat Neurosci. 2019 Apr;22(4):556–64.

Slaymaker IM, Gao L, Zetsche B, Scott DA, Yan WX, Zhang F. Rationally engineered Cas9 nucleases with improved specificity. Science. 2016 Jan 1;351(6268):84–8.

Satterstrom FK, Kosmicki JA, Wang J, Breen MS, De Rubeis S, An J-Y, et al. Large-scale exome sequencing study implicates both developmental and functional changes in the neurobiology of autism. Cell. 2020 Feb 6;180(3):568-584.e23.

Sun W, Poschmann J, Cruz-Herrera del Rosario R, Parikshak NN, Hajan HS, Kumar V, et al. Histone acetylome-wide association study of autism spectrum disorder. Cell. 2016 Nov;167(5):1385-1397.e11.

Zhong S, Zhang S, Fan X, Wu Q, Yan L, Dong J, et al. A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex. Nature. 2018 Mar 22;555(7697):524–8.

Pelch KE, Bolden AL, Kwiatkowski CF. Environmental chemicals and autism: A scoping review of the human and animal research. Environ Health Perspect. 2019 Apr;127(4):46001.

Brito A, Russo FB, Muotri AR, Beltrão-Braga PCB. Autism spectrum disorders and disease modeling using stem cells. Cell Tissue Res. 2018 Jan;371(1):153–60.

Ramme AP, Koenig L, Hasenberg T, Schwenk C, Magauer C, Faust D, et al. Autologous induced pluripotent stem cell-derived four-organ-chip. Future Sci OA. 2019 Sep 10;5(8):FSO413.

Shaji M, Tamada A, Fujimoto K, Muguruma K, Karsten SL, Yokokawa R. Deciphering potential vascularization factors of on-chip co-cultured hiPSC-derived cerebral organoids. Lab Chip. 2024 Feb 13;24(4):680–96.

Sawai T, Hayashi Y, Niikawa T, Shepherd J, Thomas E, Lee T-L, et al. Mapping the ethical issues of brain organoid research and application. AJOB Neurosci. 2022 Apr;13(2):81–94.

Niikawa T, Hayashi Y, Shepherd J, Sawai T. Human brain organoids and consciousness. Neuroethics [Internet]. 2022 Apr;15(1). Available from: http://dx.doi.org/10.1007/s12152-022-09483-1

Posted


Submitted: 2024-09-08 08:22:36 UTC

Published: 2024-09-10 08:29:17 UTC
Section
Biology, Life Sciences & Basic Medicine